BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011D05SP1|AL426203
(745 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1441 0.0
3x_Contig1015 564 e-161
3x_Contig63 545 e-155
3x_Contig1745 407 e-113
>3x_Contig1806
Length = 53694
Score = 1441 bits (725), Expect = 0.0
Identities = 738/743 (99%), Gaps = 1/743 (0%)
Strand = Plus / Plus
Query: 3 acccgtggtggattctgtttcggtgctggtacmactcgaaaagactaagactgttactct 62
|||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 51672 acccgtggtggattctgtttcggtgctggtaccaat-gaaaagactaagactgttactct 51730
Query: 63 acaaaagggtaaatcgtataaagtcagaatcgaatatggctctggcccaactagccaact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51731 acaaaagggtaaatcgtataaagtcagaatcgaatatggctctggcccaactagccaact 51790
Query: 123 ggtaagtgaattcggagctggtgctctccaggttggtgttgcaaaggctattgatgcaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51791 ggtaagtgaattcggagctggtgctctccaggttggtgttgcaaaggctattgatgcaga 51850
Query: 183 tgaggaaatcaagaaggcagcaaaacttgctgcgggtcacgatahagccattttatgtat 242
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 51851 tgaggaaatcaagaaggcagcaaaacttgctgcgggtcacgataaagccattttatgtat 51910
Query: 243 tggtttgaacgcagaatgggaatctgaaggtcatgatagggaagatatgactttgccagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51911 tggtttgaacgcagaatgggaatctgaaggtcatgatagggaagatatgactttgccagg 51970
Query: 303 aagaacaaacgatctcgtccgtgctgttttggaggccaatcctaacactgtaattgtyaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 51971 aagaacaaacgatctcgtccgtgctgttttggaggccaatcctaacactgtaattgtcaa 52030
Query: 363 ccagtctggtactcctgtcgagttcccatgattacaaaaagctaaagctctcattcaagc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52031 ccagtctggtactcctgtcgagttcccatgattacaaaaagctaaagctctcattcaagc 52090
Query: 423 ttggtacggaggtaatgagttgggcaatgctattgctgatgtcttgtatggtgacgttat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52091 ttggtacggaggtaatgagttgggcaatgctattgctgatgtcttgtatggtgacgttat 52150
Query: 483 tccaagtggtaaattatctctctcatggccaataaaccttgaagataacccaacttattt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52151 tccaagtggtaaattatctctctcatggccaataaaccttgaagataacccaacttattt 52210
Query: 543 gaacttcaagactgaatttggcagagttctctacggtgaggatattttcattggatacag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52211 gaacttcaagactgaatttggcagagttctctacggtgaggatattttcattggatacag 52270
Query: 603 attctatgagaagttgcaaagaagagttgcattccccttcggttacgggttatcttatac 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52271 attctatgagaagttgcaaagaagagttgcattccccttcggttacgggttatcttatac 52330
Query: 663 tgaatttgctttatctaatctacaagtacaaacggatgaggaggttatctctgtttctgt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52331 tgaatttgctttatctaatctacaagtacaaacggatgaggaggttatctctgtttctgt 52390
Query: 723 taatgtaaagaacgcaggtgagg 745
|||||||||||||||||||||||
Sbjct: 52391 taatgtaaagaacgcaggtgagg 52413
>3x_Contig1015
Length = 4152
Score = 564 bits (284), Expect = e-161
Identities = 457/514 (88%), Gaps = 2/514 (0%)
Strand = Plus / Plus
Query: 15 ttctgtttcggtgctggtacmactcgaaaagactaagactgttactctacaaaagggtaa 74
|||||||||||||| ||||| | | |||||||| |||||||||||| |||||||||||||
Sbjct: 3640 ttctgtttcggtgccggtaccatt-gaaaagaccaagactgttactttacaaaagggtaa 3698
Query: 75 atcgtataaagtcagaatcgaatatggctctggcccaactagccaactggtaagtgaatt 134
| ||||||||||||||||||||||||| ||||| ||||| ||| | |||| ||||||||
Sbjct: 3699 agcgtataaagtcagaatcgaatatggttctggtccaacaagcgagttggtgagtgaatt 3758
Query: 135 cggagctggtgctctccaggttggtgttgcaaaggctattgatgcagatgaggaaatcaa 194
|||| |||||||||| ||||||||||| | || ||||||||||||||||||||||||||
Sbjct: 3759 cggatctggtgctcttcaggttggtgtcaccaaagctattgatgcagatgaggaaatcaa 3818
Query: 195 gaaggcagcaaaacttgctgcgggtcacgatahagccattttatgtattggtttgaacgc 254
||| |||||||| ||||| || | ||| |||| |||||||||||| || |||||||| ||
Sbjct: 3819 gaaagcagcaaagcttgcagccgctcatgataaagccattttatgcatcggtttgaatgc 3878
Query: 255 agaatgggaatctgaaggtcatgatagggaagatatgactttgccaggaagaacaaacga 314
|||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 3879 tgaatgggaatctgagggccatgatagggaagatatgacgttgccagcaagaacaaacga 3938
Query: 315 tctcgtccgtgctgttttggaggccaatcctaacactgtaattgtyaaccagtctggtac 374
||| || |||||||| |||||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 3939 tctagttcgtgctgtattggaggctaaccctaacactgtaattgtcaaccagtctggtac 3998
Query: 375 tcctgtcgagttcccatgattacaaaaagctaaagctctcattcaagcttggtacggagg 434
|||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 3999 tcctgtcgagttcccatggttacaaaaagctaatgctctggttcaagcttggtacggagg 4058
Query: 435 taatgagttgggcaatgctattgctgatgtcttgtatggtgacgttattcc-aagtggta 493
|||||| |||| |||||||||||||| |||||||||||||| ||| |||| || ||| |
Sbjct: 4059 caatgagctgggtaatgctattgctgacgtcttgtatggtgatgttgttccaaaatggga 4118
Query: 494 aattatctctctcatggccaataaaccttgaaga 527
|||||||||||||||||| | |||| ||||||||
Sbjct: 4119 aattatctctctcatggctattaaagcttgaaga 4152
>3x_Contig63
Length = 856
Score = 545 bits (274), Expect = e-155
Identities = 316/330 (95%)
Strand = Plus / Minus
Query: 416 ttcaagcttggtacggaggtaatgagttgggcaatgctattgctgatgtcttgtatggtg 475
||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || |
Sbjct: 820 ttcaagcttggtacggaggtaatgaactgggcaatgctattgccgatgtcttgtacgggg 761
Query: 476 acgttattccaagtggtaaattatctctctcatggccaataaaccttgaagataacccaa 535
||||| ||||| |||||||||||||||| ||||||||| |||| ||||||||||||||||
Sbjct: 760 acgttgttccaggtggtaaattatctctgtcatggccattaaaacttgaagataacccaa 701
Query: 536 cttatttgaacttcaagactgaatttggcagagttctctacggtgaggatattttcattg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 cttatttgaacttcaagactgaatttggcagagttctctacggtgaggatattttcattg 641
Query: 596 gatacagattctatgagaagttgcaaagaagagttgcattccccttcggttacgggttat 655
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gatacagattttatgagaagttgcaaagaagagttgcattccccttcggttacgggttat 581
Query: 656 cttatactgaatttgctttatctaatctacaagtacaaacggatgaggaggttatctctg 715
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 580 cttatactgaatttgctttatctcatctacaagtacaaacggatgaggaggttatctctg 521
Query: 716 tttctgttaatgtaaagaacgcaggtgagg 745
|||||||||||||||||||| | |||||||
Sbjct: 520 tttctgttaatgtaaagaacacgggtgagg 491
>3x_Contig1745
Length = 19830
Score = 407 bits (205), Expect = e-113
Identities = 323/363 (88%), Gaps = 1/363 (0%)
Strand = Plus / Minus
Query: 15 ttctgtttcggtgctggtacmactcgaaaagactaagactgttactctacaaaagggtaa 74
||||| |||||||||||||| | |||||||| |||||||| | ||| |||||||||||
Sbjct: 423 ttctgcttcggtgctggtaccgat-gaaaagaccaagactgtcagtctgcaaaagggtaa 365
Query: 75 atcgtataaagtcagaatcgaatatggctctggcccaactagccaactggtaagtgaatt 134
| |||||||||| ||||||||||| || ||||| ||||| || | |||| ||||||||
Sbjct: 364 agcgtataaagttagaatcgaatacggttctggtccaacaagtgagttggtgagtgaatt 305
Query: 135 cggagctggtgctctccaggttggtgttgcaaaggctattgatgcagatgaggaaatcaa 194
||| |||| | | | || ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 304 tggatctggcggttttcaagttggtgttgccaaggctattgatgcagatgaagaaatcag 245
Query: 195 gaaggcagcaaaacttgctgcgggtcacgatahagccattttatgtattggtttgaacgc 254
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 244 gaaggcagcaaaacttgctgcgggtcacgacaaagccattttatgtattggtttgaacgc 185
Query: 255 agaatgggaatctgaaggtcatgatagggaagatatgactttgccaggaagaacaaacga 314
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 184 agaatgggaatctgaaggtcatgatagggaagatatgatcttgccaggaagaacaaacga 125
Query: 315 tctcgtccgtgctgttttggaggccaatcctaacactgtaattgtyaaccagtctggtac 374
||||||||||||||| || |||||||||||||||||||| || | ||||||||||||||
Sbjct: 124 tctcgtccgtgctgtcttagaggccaatcctaacactgtcatcatcaaccagtctggtac 65
Query: 375 tcc 377
|||
Sbjct: 64 tcc 62
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4869
Number of Sequences: 1807
Number of extensions: 4869
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 4
length of query: 745
length of database: 10,358,551
effective HSP length: 16
effective length of query: 729
effective length of database: 10,329,639
effective search space: 7530306831
effective search space used: 7530306831
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)